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| author | Shivesh Mandalia <shivesh.mandalia@outlook.com> | 2020-03-03 02:36:22 +0000 |
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| committer | Shivesh Mandalia <shivesh.mandalia@outlook.com> | 2020-03-03 02:36:22 +0000 |
| commit | f18364ec6522466afbdd64bdf563a54c9e6e4db9 (patch) | |
| tree | 9bee7890ee256e999327813c00f0d80cd73b2c11 /docs/source/overview.rst | |
| parent | faadd4e4eb901f7a49128b3b7e6a0a3ffbcd4664 (diff) | |
| download | GolemFlavor-f18364ec6522466afbdd64bdf563a54c9e6e4db9.tar.gz GolemFlavor-f18364ec6522466afbdd64bdf563a54c9e6e4db9.zip | |
documentation
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diff --git a/docs/source/overview.rst b/docs/source/overview.rst index e09628e..65e1871 100644 --- a/docs/source/overview.rst +++ b/docs/source/overview.rst @@ -5,3 +5,37 @@ ******** Overview ******** + +---------------------------------- +What is Astrophysical Flavor data? +---------------------------------- + +This is data of the *flavor* of a neutrino taken at the `IceCube neutrino +observatory <https://icecube.wisc.edu/>`_, which is a cubic kilometer array of +optical sensors embedded in the glacial ice at the South Pole. In particular, +*astrophysical* neutrinos are ones that are very-high-energy and come from +astrophysical origins such as `active galactic nuclei +<https://doi.org/10.1126/science.aat2890>`_. For more on the physics behind +neutrinos see the :doc:`physics` section. + +------------------------------------- +What does the GolemFlavor package do? +------------------------------------- + +This package provides utilities for astrophysical neutrino propagation and +Bayesian statistical modeling focused on advanced Markov Chain Monte Carlo +(MCMC) algorithms. It has been used to make constraints on New Physics models +in the Astrophysical Flavor, as motivated by the paper `*New Physics in +Astrophysical Neutrino Flavor* +<https://doi.org/10.1103/PhysRevLett.115.161303>`_. For more information on +the statistical modeling see the :doc:`statistics` section. + +-------- +Features +-------- + +- **Portable Flavor Functions**: A set of useful functions for calculating measured flavor compositions given a source composition and a mixing matrix. +- **MCMC Algorithms**: Affine invariant and nested sampling algorithms provided by `emcee <https://emcee.readthedocs.io/>`_ and `MultiNest <https://doi.org/10.1111/j.1365-2966.2009.14548.x>`_. +- **Anarchic Sampling**: Sampling of the neutrino mixing matrix is done under the `*neutrino mixing anarchy* <https://doi.org/10.1016/j.physletb.2003.08.045>`_ hypothesis to ensure an unbiased prior. +- **Distributed and parallel computing**: Scripts included to manage the workload across a CPU cluster using `HTCondor <https://research.cs.wisc.edu/htcondor/>`_. +- **Visualization**: Produce ternary plots of the flavour composition using the `python-ternary <https://zenodo.org/badge/latestdoi/19505/marcharper/python-ternary>`_ package and joint posterior plots for analyzing MCMC chains using the `getdist <https://getdist.readthedocs.io/en/latest/>`_ package. |
